Computational Biology Group > Team > Peter N. Robinson

Dr. med. Peter N. Robinson
Institute for Medical Genetics
Universitätsklinikum Charité
Humboldt-Universität
Augustenburger Platz 1
13353 Berlin
Germany

email: peter.robinson(at)charite.de,
Phone: +49 (0)30 / 450 569 124. 
 ... waterway around berlin ...

Research Interests

I am a physician by training and completed my medical education at the University of Pennsylvania followed by an internship at Yale. Currently I hold a research scientist position at the Institute for Medical Genetics of the Charité Berlin. Additionally, I have obtained a BA in Mathematics and a Master of Science in Computer Science from Columbia University in New York City, and a main focus in my research has been to use mathematical and bioinformatic models to understand biology and hereditary disease. In addition to computational biology, we also do "wetlab" molecular genetics research in hereditary disease as well as in the molecular mechanisms of fracture healing (SFB760).

Selected Publications

  • Bauer S, Gagneur J, and Robinson PN (2010) GOing Bayesian: model-based gene-set analysis of genome-scale data. Nucleic Acids Research
  • Krawitz P, Rödelsperger C, Jäger M, Jostins L, Bauer S, Robinson PN (2010) Microindel detection in short-read sequence data. Bioinformatics, 26:722-729
  • Köhler S, Schulz MH, Krawitz P, Bauer S, Dölken S, Ott CE, Mundlos C, Horn D, Mundlos S, Robinson PN
    Clinical Diagnostics in Human Genetics with Semantic Similarity Searches in Ontologies. The American Journal of Human Genetics 85:457-64
  • Türkmen S, Guo G, Garshasbi M, Hoffmann K, Alshalah AJ, Mischung C, Kuss A, Humphrey N, Mundlos S, Robinson PN (2009) CA8 Mutations Cause a Novel Syndrome Characterized by Ataxia and Mild Mental Retardation with Predisposition to Quadrupedal Gait. PLoS Genet. 5:e1000487.
  • Robinson PN et al. (2008) The Human Phenotype Ontology: A Tool for Annotating and Analyzing Human Hereditary Disease. American Journal of Human Genetics
  • Köhler S, Bauer S, Horn D, Robinson PN (2008) Walking the Interactome for Prioritization of Candidate Disease Genes. American Journal of Human Genetics 82, 949-958.
  • Guo G, Bauer S, Hecht J, Schulz MH, Busche A, Robinson PN (2007) A short ultraconserved
    sequence drives transcription from an alternate FBN1 promoter. Int J Biochem Cell Biol : 2007
    Oct 2; [Epub ahead of print]. [pubmed]
  • Booms P, Ney A, Barthel F, Moroy G, Counsell D, Gille C, Guo G, Pregla R, Mundlos S, Alix AJP,
    Robinson PN (2006) A Fibrillin-1-Fragment Containing the Elastin-Binding-Protein GxxPG
    Consensus Sequence Upregulates MMP-1 Expression: Biochemical and Computational Analysis.
    Journal of Molecular and Cellular Cardiology 40:234{246. [pubmed]
  • Guo G, Booms P, Halushka M, Dietz HC, Ney A, Stricker S, Hecht J, Mundlos S,
    Robinson PN. (2006) Induction of macrophage chemotaxis by aortic extracts of the mgR Marfan mouse
    model and a GxxPG-containing fibrillin-1 fragment. Circulation. 114:1855-62. [pubmed]
  • Robinson PN, Böhme U, Lopez R, Mundlos S, Nüurnberg P (2004) Gene-Ontology analysis reveals
    association of tissue-specific 5' CpG-island genes with development and embryogenesis. Hum Mol
    Genet
    13:1969-78. [pubmed]

Marfan syndrome

A main "wetlab" molecular genetics research interest in our group has been the Marfan syndrome. See the project page for more information.