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processing orphanet number: 79230	number annotations: 15
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processing orphanet number: 2003	number annotations: 13
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processing orphanet number: 261236	number annotations: 40
processing orphanet number: 2020	number annotations: 43
processing orphanet number: 3350	number annotations: 4
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processing orphanet number: 2019	number annotations: 10
processing orphanet number: 2017	number annotations: 4
processing orphanet number: 740	number annotations: 92
processing orphanet number: 2016	number annotations: 8
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processing orphanet number: 2014	number annotations: 2
processing orphanet number: 743	number annotations: 14
processing orphanet number: 744	number annotations: 101
processing orphanet number: 2013	number annotations: 19
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processing orphanet number: 2234	number annotations: 19
processing orphanet number: 2233	number annotations: 15
processing orphanet number: 488594	number annotations: 17
processing orphanet number: 965	number annotations: 26
processing orphanet number: 966	number annotations: 13
processing orphanet number: 100024	number annotations: 13
processing orphanet number: 100025	number annotations: 16
processing orphanet number: 968	number annotations: 18
processing orphanet number: 100026	number annotations: 20
processing orphanet number: 969	number annotations: 22
processing orphanet number: 40366	number annotations: 27
processing orphanet number: 263665	number annotations: 14
processing orphanet number: 101330	number annotations: 16
processing orphanet number: 2253	number annotations: 7
processing orphanet number: 2252	number annotations: 6
processing orphanet number: 2251	number annotations: 24
processing orphanet number: 2250	number annotations: 25
processing orphanet number: 79474	number annotations: 90
processing orphanet number: 79473	number annotations: 16
processing orphanet number: 79476	number annotations: 16
processing orphanet number: 970	number annotations: 15
processing orphanet number: 2249	number annotations: 20
processing orphanet number: 79478	number annotations: 3
processing orphanet number: 2248	number annotations: 8
processing orphanet number: 971	number annotations: 11
processing orphanet number: 79477	number annotations: 19
processing orphanet number: 972	number annotations: 10
processing orphanet number: 401866	number annotations: 25
processing orphanet number: 973	number annotations: 5
processing orphanet number: 2246	number annotations: 9
processing orphanet number: 974	number annotations: 46
processing orphanet number: 976	number annotations: 6
processing orphanet number: 977	number annotations: 16
processing orphanet number: 978	number annotations: 24
processing orphanet number: 254704	number annotations: 8
processing orphanet number: 140905	number annotations: 5
processing orphanet number: 140908	number annotations: 9
processing orphanet number: 314034	number annotations: 11
processing orphanet number: 2261	number annotations: 15
processing orphanet number: 981	number annotations: 5
processing orphanet number: 983	number annotations: 11
processing orphanet number: 2258	number annotations: 4
processing orphanet number: 2257	number annotations: 1
processing orphanet number: 2256	number annotations: 22
processing orphanet number: 2255	number annotations: 40
processing orphanet number: 988	number annotations: 6
processing orphanet number: 989	number annotations: 26
processing orphanet number: 100006	number annotations: 10
processing orphanet number: 100008	number annotations: 5
processing orphanet number: 163634	number annotations: 24
processing orphanet number: 73267	number annotations: 6
processing orphanet number: 2274	number annotations: 8
processing orphanet number: 2273	number annotations: 78
processing orphanet number: 99892	number annotations: 22
processing orphanet number: 2271	number annotations: 8
processing orphanet number: 97230	number annotations: 16
processing orphanet number: 97231	number annotations: 35
processing orphanet number: 99893	number annotations: 20
processing orphanet number: 990	number annotations: 19
processing orphanet number: 991	number annotations: 31
processing orphanet number: 994	number annotations: 24
processing orphanet number: 324290	number annotations: 12
processing orphanet number: 34587	number annotations: 6
processing orphanet number: 2268	number annotations: 23
processing orphanet number: 998	number annotations: 7
processing orphanet number: 999	number annotations: 16
processing orphanet number: 37612	number annotations: 27
processing orphanet number: 100070	number annotations: 33
processing orphanet number: 100073	number annotations: 8
processing orphanet number: 99889	number annotations: 30
processing orphanet number: 100075	number annotations: 32
processing orphanet number: 100076	number annotations: 35
processing orphanet number: 97229	number annotations: 35
processing orphanet number: 100077	number annotations: 31
processing orphanet number: 2287	number annotations: 2
processing orphanet number: 99885	number annotations: 35
processing orphanet number: 2285	number annotations: 8
processing orphanet number: 99886	number annotations: 31
processing orphanet number: 73273	number annotations: 16
processing orphanet number: 73274	number annotations: 12
processing orphanet number: 99880	number annotations: 35
processing orphanet number: 73272	number annotations: 42
processing orphanet number: 2278	number annotations: 9
processing orphanet number: 100069	number annotations: 11
processing orphanet number: 2290	number annotations: 11
processing orphanet number: 2298	number annotations: 51
processing orphanet number: 163654	number annotations: 39
processing orphanet number: 2297	number annotations: 7
processing orphanet number: 2295	number annotations: 8
processing orphanet number: 2292	number annotations: 2
processing orphanet number: 2291	number annotations: 5
processing orphanet number: 2289	number annotations: 18
processing orphanet number: 85277	number annotations: 18
processing orphanet number: 85276	number annotations: 38
processing orphanet number: 85279	number annotations: 25
processing orphanet number: 85278	number annotations: 41
processing orphanet number: 85273	number annotations: 12
processing orphanet number: 85275	number annotations: 4
processing orphanet number: 85274	number annotations: 15
processing orphanet number: 100050	number annotations: 26
processing orphanet number: 163649	number annotations: 41
processing orphanet number: 46532	number annotations: 6
processing orphanet number: 97244	number annotations: 20
processing orphanet number: 97240	number annotations: 22
processing orphanet number: 33226	number annotations: 45
processing orphanet number: 53693	number annotations: 11
processing orphanet number: 53697	number annotations: 7
processing orphanet number: 324262	number annotations: 17
processing orphanet number: 65682	number annotations: 16
processing orphanet number: 65684	number annotations: 10
processing orphanet number: 85293	number annotations: 49
processing orphanet number: 85292	number annotations: 7
processing orphanet number: 97278	number annotations: 32
processing orphanet number: 97279	number annotations: 34
processing orphanet number: 140952	number annotations: 28
processing orphanet number: 85295	number annotations: 3
processing orphanet number: 85294	number annotations: 4
processing orphanet number: 85297	number annotations: 6
processing orphanet number: 401805	number annotations: 9
processing orphanet number: 85280	number annotations: 17
processing orphanet number: 85282	number annotations: 25
processing orphanet number: 97261	number annotations: 38
processing orphanet number: 85287	number annotations: 12
processing orphanet number: 140966	number annotations: 2
processing orphanet number: 300298	number annotations: 20
processing orphanet number: 33208	number annotations: 3
processing orphanet number: 85284	number annotations: 29
processing orphanet number: 85283	number annotations: 9
processing orphanet number: 85286	number annotations: 12
processing orphanet number: 100081	number annotations: 25
processing orphanet number: 100082	number annotations: 25
processing orphanet number: 100083	number annotations: 14
processing orphanet number: 100084	number annotations: 11
processing orphanet number: 100085	number annotations: 38
processing orphanet number: 100086	number annotations: 18
processing orphanet number: 231230	number annotations: 6
processing orphanet number: 97297	number annotations: 55
processing orphanet number: 100080	number annotations: 22
processing orphanet number: 97290	number annotations: 14
processing orphanet number: 100078	number annotations: 31
processing orphanet number: 100079	number annotations: 30
processing orphanet number: 231222	number annotations: 12
processing orphanet number: 140976	number annotations: 19
processing orphanet number: 231226	number annotations: 6
processing orphanet number: 34527	number annotations: 15
processing orphanet number: 100093	number annotations: 27
processing orphanet number: 90650	number annotations: 27
processing orphanet number: 90653	number annotations: 20
processing orphanet number: 90652	number annotations: 55
processing orphanet number: 90654	number annotations: 8
processing orphanet number: 97289	number annotations: 24
processing orphanet number: 97285	number annotations: 14
processing orphanet number: 97286	number annotations: 10
processing orphanet number: 97287	number annotations: 31
processing orphanet number: 97280	number annotations: 42
processing orphanet number: 100	number annotations: 37
processing orphanet number: 101	number annotations: 26
processing orphanet number: 438274	number annotations: 10
processing orphanet number: 97282	number annotations: 41
processing orphanet number: 102	number annotations: 27
processing orphanet number: 97283	number annotations: 35
processing orphanet number: 104	number annotations: 14
processing orphanet number: 107	number annotations: 19
processing orphanet number: 90646	number annotations: 18
processing orphanet number: 108	number annotations: 31
processing orphanet number: 109	number annotations: 55
processing orphanet number: 231214	number annotations: 48
processing orphanet number: 34516	number annotations: 12
processing orphanet number: 34515	number annotations: 17
processing orphanet number: 95459	number annotations: 9
processing orphanet number: 94125	number annotations: 22
processing orphanet number: 99812	number annotations: 35
processing orphanet number: 99811	number annotations: 7
processing orphanet number: 63862	number annotations: 15
processing orphanet number: 75840	number annotations: 31
processing orphanet number: 163596	number annotations: 12
processing orphanet number: 94122	number annotations: 11
processing orphanet number: 110	number annotations: 25
processing orphanet number: 111	number annotations: 4
processing orphanet number: 112	number annotations: 2
processing orphanet number: 113	number annotations: 15
processing orphanet number: 114	number annotations: 10
processing orphanet number: 115	number annotations: 21
processing orphanet number: 116	number annotations: 77
processing orphanet number: 117	number annotations: 68
processing orphanet number: 118	number annotations: 6
processing orphanet number: 231242	number annotations: 4
processing orphanet number: 83473	number annotations: 16
processing orphanet number: 119	number annotations: 13
processing orphanet number: 83472	number annotations: 15
processing orphanet number: 231249	number annotations: 4
processing orphanet number: 75857	number annotations: 49
processing orphanet number: 99803	number annotations: 20
processing orphanet number: 71493	number annotations: 24
processing orphanet number: 247604	number annotations: 15
processing orphanet number: 276152	number annotations: 39
processing orphanet number: 122	number annotations: 10
processing orphanet number: 83469	number annotations: 18
processing orphanet number: 123	number annotations: 5
processing orphanet number: 124	number annotations: 18
processing orphanet number: 125	number annotations: 43
processing orphanet number: 36237	number annotations: 8
processing orphanet number: 126	number annotations: 10
processing orphanet number: 83465	number annotations: 5
processing orphanet number: 127	number annotations: 34
processing orphanet number: 129	number annotations: 9
processing orphanet number: 83461	number annotations: 6
processing orphanet number: 231237	number annotations: 3
processing orphanet number: 300373	number annotations: 20
processing orphanet number: 94147	number annotations: 32
processing orphanet number: 99832	number annotations: 15
processing orphanet number: 131	number annotations: 18
processing orphanet number: 357154	number annotations: 7
processing orphanet number: 136	number annotations: 37
processing orphanet number: 252164	number annotations: 25
processing orphanet number: 137	number annotations: 26
processing orphanet number: 138	number annotations: 88
processing orphanet number: 314978	number annotations: 16
processing orphanet number: 30925	number annotations: 9
processing orphanet number: 99827	number annotations: 23
processing orphanet number: 99826	number annotations: 24
processing orphanet number: 99829	number annotations: 29
processing orphanet number: 99828	number annotations: 22
processing orphanet number: 99825	number annotations: 17
processing orphanet number: 1809	number annotations: 18
processing orphanet number: 99824	number annotations: 29
processing orphanet number: 252183	number annotations: 28
processing orphanet number: 140	number annotations: 38
processing orphanet number: 141	number annotations: 18
processing orphanet number: 142	number annotations: 23
processing orphanet number: 143	number annotations: 37
processing orphanet number: 144	number annotations: 52
processing orphanet number: 145	number annotations: 7
processing orphanet number: 147	number annotations: 7
processing orphanet number: 148	number annotations: 18
processing orphanet number: 1808	number annotations: 10
processing orphanet number: 1807	number annotations: 23
processing orphanet number: 1806	number annotations: 25
processing orphanet number: 1803	number annotations: 18
processing orphanet number: 99819	number annotations: 15
processing orphanet number: 1802	number annotations: 13
processing orphanet number: 1801	number annotations: 18
processing orphanet number: 73229	number annotations: 5
processing orphanet number: 46488	number annotations: 9
processing orphanet number: 73224	number annotations: 20
processing orphanet number: 46486	number annotations: 7
processing orphanet number: 46487	number annotations: 10
processing orphanet number: 99857	number annotations: 26
processing orphanet number: 399808	number annotations: 8
processing orphanet number: 99852	number annotations: 14
processing orphanet number: 95496	number annotations: 17
processing orphanet number: 221008	number annotations: 18
processing orphanet number: 399805	number annotations: 7
processing orphanet number: 95494	number annotations: 39
processing orphanet number: 154	number annotations: 8
processing orphanet number: 1811	number annotations: 7
processing orphanet number: 1810	number annotations: 15
processing orphanet number: 156	number annotations: 21
processing orphanet number: 157	number annotations: 20
processing orphanet number: 158	number annotations: 9
processing orphanet number: 36204	number annotations: 18
processing orphanet number: 159	number annotations: 31
processing orphanet number: 87876	number annotations: 31
processing orphanet number: 1819	number annotations: 19
processing orphanet number: 1818	number annotations: 12
processing orphanet number: 46485	number annotations: 2
processing orphanet number: 1816	number annotations: 16
processing orphanet number: 85212	number annotations: 24
processing orphanet number: 1812	number annotations: 39
processing orphanet number: 276193	number annotations: 18
processing orphanet number: 95484	number annotations: 28
processing orphanet number: 276198	number annotations: 27
processing orphanet number: 444099	number annotations: 19
processing orphanet number: 163	number annotations: 2
processing orphanet number: 1822	number annotations: 16
processing orphanet number: 166	number annotations: 13
processing orphanet number: 167	number annotations: 45
processing orphanet number: 168	number annotations: 3
processing orphanet number: 169	number annotations: 2
processing orphanet number: 85203	number annotations: 3
processing orphanet number: 280200	number annotations: 35
processing orphanet number: 85202	number annotations: 24
processing orphanet number: 1827	number annotations: 37
processing orphanet number: 85201	number annotations: 38
processing orphanet number: 1826	number annotations: 37
processing orphanet number: 1825	number annotations: 25
processing orphanet number: 1824	number annotations: 21
processing orphanet number: 99878	number annotations: 23
processing orphanet number: 99877	number annotations: 20
processing orphanet number: 73246	number annotations: 25
processing orphanet number: 73247	number annotations: 10
processing orphanet number: 99879	number annotations: 14
processing orphanet number: 99874	number annotations: 5
processing orphanet number: 73245	number annotations: 7
processing orphanet number: 99873	number annotations: 7
processing orphanet number: 170	number annotations: 12
processing orphanet number: 99876	number annotations: 10
processing orphanet number: 171	number annotations: 55
processing orphanet number: 255241	number annotations: 33
processing orphanet number: 99875	number annotations: 6
processing orphanet number: 172	number annotations: 14
processing orphanet number: 174	number annotations: 18
processing orphanet number: 99872	number annotations: 7
processing orphanet number: 175	number annotations: 79
processing orphanet number: 99871	number annotations: 25
processing orphanet number: 176	number annotations: 68
processing orphanet number: 1832	number annotations: 20
processing orphanet number: 177	number annotations: 20
processing orphanet number: 1830	number annotations: 22
processing orphanet number: 179	number annotations: 23
processing orphanet number: 1839	number annotations: 18
processing orphanet number: 1837	number annotations: 15
processing orphanet number: 1836	number annotations: 15
processing orphanet number: 1834	number annotations: 42
processing orphanet number: 99867	number annotations: 30
processing orphanet number: 99868	number annotations: 13
processing orphanet number: 180	number annotations: 8
processing orphanet number: 73256	number annotations: 19
processing orphanet number: 181	number annotations: 14
processing orphanet number: 183	number annotations: 53
processing orphanet number: 184	number annotations: 15
processing orphanet number: 221016	number annotations: 28
processing orphanet number: 186	number annotations: 32
processing orphanet number: 188	number annotations: 23
processing orphanet number: 189	number annotations: 29
processing orphanet number: 1842	number annotations: 39
processing orphanet number: 1849	number annotations: 1
processing orphanet number: 1848	number annotations: 18
processing orphanet number: 190	number annotations: 8
processing orphanet number: 191	number annotations: 62
processing orphanet number: 192	number annotations: 72
processing orphanet number: 193	number annotations: 64
processing orphanet number: 194	number annotations: 1
processing orphanet number: 79373	number annotations: 48
processing orphanet number: 93672	number annotations: 45
processing orphanet number: 195	number annotations: 20
processing orphanet number: 1855	number annotations: 11
processing orphanet number: 198	number annotations: 70
processing orphanet number: 199	number annotations: 100
processing orphanet number: 314911	number annotations: 16
processing orphanet number: 1852	number annotations: 6
processing orphanet number: 221054	number annotations: 19
processing orphanet number: 314918	number annotations: 4
processing orphanet number: 1858	number annotations: 15
processing orphanet number: 1856	number annotations: 13
processing orphanet number: 444051	number annotations: 19
processing orphanet number: 79361	number annotations: 16
processing orphanet number: 1865	number annotations: 16
processing orphanet number: 247691	number annotations: 22
processing orphanet number: 1861	number annotations: 13
processing orphanet number: 1860	number annotations: 40
processing orphanet number: 1867	number annotations: 10
processing orphanet number: 1880	number annotations: 18
processing orphanet number: 79395	number annotations: 7
processing orphanet number: 79394	number annotations: 13
processing orphanet number: 79397	number annotations: 9
processing orphanet number: 79396	number annotations: 14
processing orphanet number: 1877	number annotations: 12
processing orphanet number: 79399	number annotations: 16
processing orphanet number: 1876	number annotations: 13
processing orphanet number: 1875	number annotations: 14
processing orphanet number: 1873	number annotations: 9
processing orphanet number: 1872	number annotations: 5
processing orphanet number: 1871	number annotations: 5
processing orphanet number: 1879	number annotations: 7
processing orphanet number: 1878	number annotations: 9
processing orphanet number: 1891	number annotations: 9
processing orphanet number: 401785	number annotations: 13
processing orphanet number: 401780	number annotations: 8
processing orphanet number: 1885	number annotations: 11
processing orphanet number: 221061	number annotations: 17
processing orphanet number: 1883	number annotations: 14
processing orphanet number: 1882	number annotations: 15
processing orphanet number: 238722	number annotations: 14
processing orphanet number: 69126	number annotations: 15
processing orphanet number: 69125	number annotations: 13
processing orphanet number: 1899	number annotations: 27
processing orphanet number: 1897	number annotations: 16
processing orphanet number: 1896	number annotations: 53
processing orphanet number: 1895	number annotations: 28
processing orphanet number: 1894	number annotations: 6
processing orphanet number: 1892	number annotations: 7
processing orphanet number: 95409	number annotations: 44
processing orphanet number: 221091	number annotations: 17
processing orphanet number: 238750	number annotations: 42
processing orphanet number: 95434	number annotations: 20
processing orphanet number: 83453	number annotations: 13
processing orphanet number: 83452	number annotations: 12
processing orphanet number: 95429	number annotations: 4
processing orphanet number: 36258	number annotations: 10
processing orphanet number: 238769	number annotations: 33
processing orphanet number: 103910	number annotations: 10
processing orphanet number: 230800	number annotations: 12
processing orphanet number: 306498	number annotations: 24
done parsing and merging: writing annotations to file /var/lib/jenkins/jobs/hpo.annotations/workspace/misc/./phenotype_annotation.tab
done.
printing warnings. please fix ASAP:
 ORPHA:85447 annotated with obsolete term: obsolete Abnormal test result (HP:0500014)
 ORPHA:86812 annotated with obsolete term: obsolete Abnormal test result (HP:0500014)
 ORPHA:2023 annotated with obsolete term: obsolete Abnormal test result (HP:0500014)
 ORPHA:2070 annotated with obsolete term: obsolete Abnormal test result (HP:0500014)
 ORPHA:100069 annotated with obsolete term: obsolete Abnormal test result (HP:0500014)

cat phenotype_annotation.tab negative_phenotype_annotation.tab | awk -F'\t' '{print $13}'  | awk -F'[][]' '{print $1}' | sort | uniq -c | sort -nr > curator-statistics.tab
echo "2018-10-09 10:02" > data_version.txt
make: Leaving directory '/var/lib/jenkins/jobs/hpo.annotations/workspace/misc'
Archiving artifacts
Triggering a new build of hpo.annotations.monthly
Finished: SUCCESS